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1. Your Input
- Input chemical : berberine

- Restriction of the results to the articles containing the gene-chemical relationships that appear in the selected PubMed articles.
Click here if you want to restrict the results to the selected PMIDs


2. Herbs that contained the input chemical

Herbs :

- XIAO GUO TANG SONG CAO (*English : SMALLFRUIT MEADOWRUE *Latin : THALICTRUM MICROGYNUM)
- GONG LAO ZI (*English : FRUCTUS MAHONAE BEALEI *Latin : NA)
- BAI MAO GEN(4) (*English : GOLDEN-SEAL *Latin : HYDRASTIS CANADENSIS)
- SHI DA GONG LAO MU (*English : LEATHERLEAF MAHONIA EQUIVALENT PLANT: MAHONIA FORTUNEI, MAHONIA JAPONICA *Latin : MAHONIA BEALEI)
- FANG JI (*English : FOURSTAMEN STEPHANIA *Latin : STEPHANIA TETRANDRA)
- WANG CHUN YU LAN (*English : BIOND MAGNOLIA *Latin : MAGNOLIA BIONDII [SYN. MAGNOLIA FARGESII])
- XIAO SAN KE ZHEN (*English : RADIX BERBERIDES WILSONEAE *Latin : NA)
- HUA JIAO (*English : BUNGE PRICKLYASH EQUIVALENT PLANT: ZANTHOXYLUM SCHINIFOLIUM *Latin : ZANTHOXYLUM BUNGEANUM)
- HUA NAN GONG LAO MU (*English : JAPANESE MAHONIA *Latin : MAHONIA JAPONICA)
- YING SHUI HUANG LIAN (*English : SLIM-TOP MEADOWRUE *Latin : THALICTRUM SIMPLEX [SYN. THALICTRUM SIMPLEX VAR. BREVIPES])
- TU HUANG LIAN (*English : WINTERGREEN BARBERRY *Latin : BERBERIS JULIANAE)
- CI HUANG LIAN (*English : RADIX ET CAULIS MAHONAE FLAVIDAE *Latin : NA)
- HUANG PI SHU (*English : CHINESE CORKTREE *Latin : PHELLODENDRON CHINENSE)
- HU BEI SHI DA GONG LAO (*English : CONFUSED MAHONIA EQUIVALENT PLANT: MAHONIA GRACILIPES *Latin : MAHONIA CONFUSA)
- ZHI YI XIAO BO (*English : DUBIOUS BARBERRY *Latin : BERBERIS DUBIA)
- SHAO CHI XIAO BO (*English : POTANIN BARBERRY *Latin : BERBERIS POTANINII)
- QIAN JIN TENG (*English : JAPANESE STAPHANIA *Latin : STEPHANIA JAPONICA)
- DA YE TANG SONG CAO (*English : FABER MEADOWRUE EQUIVALENT PLANT: THALICTRUM ACUTIFOLIUM , THALICTRUM FORTUNEI *Latin : THALICTRUM FABERI)
- BAI YAO ZI (*English : ORIENTAL STEPHANIA *Latin : STEPHANIA CEPHARANTHA)
- JIN HUA XIAO BO (*English : WILSON BARBERRY *Latin : BERBERIS WILSONAE)
- CHENG KOU SHI DA GONG LAO (*English : CHENGKOU MAHONIA *Latin : MAHONIA SHENII)
- CHUAN HUANG LIAN (*English : RHIZOME OF CHINESE GOLDTHREAD *Latin : RHIZOMA COPTIDIS)
- XI BING SHI DA GONG LAO (*English : SUBTRIPLINERVED MAHONIA *Latin : MAHONIA GRACILIPES)
- BAN RUI TANG SONG CAO (*English : PETALFORMED MEADOWRUE *Latin : THALICTRUM PETALOIDEUM)
- XIAN E HUANG LIAN (*English : LINEARISEPAL GOLDTHREAD* *Latin : COPTIS LINEARISEPALA)
- XIAN HUANG XIAO BO (*English : REDDROP BARBERRY *Latin : BERBERIS DIAPHANA)
- RI BEN XIAO BO (*English : JAPANESE BARBERRY *Latin : BERBERIS THUNBERGII)
- XIAO BO (*English : AMUR BARBERRY *Latin : BERBERIS AMURENSIS)
- DUI YE YUAN HU (*English : LEDEOUR CORYDALIS* *Latin : CORYDALIS LEDEBOURIANA)
- SHI DA GONG LAO YE (*English : LEATHERLEAF MAHONIA LEAF EQUIVALENT PLANT: MAHONIA FORTUNEI, MAHONIA JAPONICA *Latin : MAHONIA BEALEI)
- XI A XU TANG SONG CAO (*English : NARROWRACEME MEADOWRUE *Latin : THALICTRUM ATRIPLEX)
- SAN JIAO YE HUANG LIAN (*English : DELTOID GOLDTHREAD *Latin : COPTIS DELTOIDEA)
- JI YING SU (*English : MEXICAN PRICKLEPOPPY *Latin : ARGEMONE MEXICANA)
- HUANG BO LUO GUO (*English : PHELLODENDRON AMURENSERUPR *Latin : NA)
- CHUAN DIAN SHI DA GONG LAO (*English : VEITCH MAHONIA *Latin : MAHONIA VEITCHIORUM)
- GU LIN YE LIAN (*English : GULIN GOLDTHREAD* *Latin : COPTIS GULINENSIS)
- YAN GUO CAO (*English : EAST-ASIA LOW MEADOWRUE *Latin : THALICTRUM THUNBERGII)
- YUN NAN HUANG LIAN (*English : YUNNAN GOLDTHREAD *Latin : COPTIS TEETOIDES [SYN. COPTIS TEETA])
- BAI QU CAI (*English : GREATER CELANDINE *Latin : CHELIDONIUM MAJUS)
- HUANG BAI (*English : AMUR CORKTREE EQUIVALENT PLANT: PHELLODENDRON CHINENSE , PHELLODENDRON CHINENSE VAR GLABRIUSCULUM, PHELLODENDRON AMURENSE VAR WILSONII *Latin : PHELLODENDRON AMURENSE)
- MA WEI LIAN (*English : MANYLEAF MEADOWRUE EQUIVALENT PLANT: THALICTRUM BAICALENSE, THALICTRUM PART : RHIZOME AND ROOT *Latin : THALICTRUM FOLIOLOSUM)
- DA ZAO (*English : CHINESE DATE EQUIVALENT PLANT: ZIZIPHUS JUJUBA VAR INERMIS *Latin : ZIZIPHUS JUJUBA)
- KUAN BAO SHI DA GONG LAO (*English : BROAD-BRACTEATE MAHONIA *Latin : MAHONIA EURYBRACTEATA)
- JIN SI MA WEI LIAN (*English : GOLD-ENTHREAD MEADOWRUE *Latin : THALICTRUM GLANDULOSISSIMUM)
- XIAO GUO SHI DA GONG LAO (*English : BODINIER MAHONIA *Latin : MAHONIA BODINIERI)
- SAN KE ZHEN (*English : ROOT OR BARK OF REDDROP BARBERRY *Latin : CORTEX BERBERIDIS)
- DUAN E HUANG LIAN (*English : SHORTSEPAL GOLDTHREAD *Latin : COPTIS CHINENSIS VAR. BREVISEPALA)
- E MEI YE HUANG LIAN (*English : OMEI MOUNTAIN GOLDTHREAD *Latin : COPTIS OMEIENSIS)
- HUI LV YAN HU SUO (*English : GREYISH-GREEN CORYDALIS *Latin : CORYDALIS ADUNCA)
- CHANG JU YAN HU SUO (*English : LONGSPUR CORYDALIS* *Latin : CORYDALIS LONGICALCARATA)
- BAI QU CAI GEN (*English : RADIX CHELIDONII MAJI *Latin : NA)
- HUANG LIAN (*English : CHINESE GOLDTHREAD EQUIVALENT PLANT: COPTIS DELTOIDEA , COPTIS OMEIENSIS , COPTIS TEETOIDES, COPTIS CHINENSIS VAR BREVISEPALA *Latin : COPTIS CHINENSIS)
- XI YE GONG LAO MU (*English : CHINESE MAHONIA *Latin : MAHONIA FORTUNEI)
- CHI BAN YAN HU SUO (*English : TOOTHEDPETAL CORYDALIS *Latin : CORYDALIS REMOTA [SYN. CORYDALIS BULBOSA VAR. TYPICA ])
- GONG LAO MU (*English : STEM OF LEATHERLEAF MAHONIA *Latin : CAULIS MAHONIAE)
- YAN HU SUO (*English : YANHUSUO *Latin : CORYDALIS YANHUSUO [SYN. CORYDALIS TURTSCHANINOVII F. YANHUSUO])



3. Genes targeted by the input chemical

Target genes :
CLEC10A , NUDT1 , ACCS , SLC4A3 , ALKBH3 , LIPE , ALKBH2 , CHEK2 , ALKBH1 , CHEK1 , BSG , HABP4 , IL12B , AKT1 , TNFSF11 , ENDOG , RECQL , REV1 , KRT7 , NEIL3 , NEIL2 , PRKD3 , DDIT3 , HECA , HPRT1 , NEIL1 , TP53 , ATF3 , CCNO , SLC45A4 , ABCB1 , PRKDC , CFI , XPA , XPC , GATA3 , GATA2 , HIF1A , RHOT2 , RHOT1 , NTHL1 , APOH , NKX2-1 , HMGXB3 , PCK2 , NAA50 , MSR1 , JUN , TNFSF14 , TIPARP , DNASE2B , XRCC2 , INSR , XRCC3 , FN1 , XRCC1 , SETX , TDP1 , CYP1A1 , NOX4 , TNFSF8 , CD22 , NOX1 , RAD18 , DIRAS3 , FEN1 , CDKN1B , OGG1 , CLTA , AKR1B1 , PCSK9 , BRCA1 , IDE , KRT20 , BRCA2 , UCHL1 , REV3L , RAC2 , RAC3 , OLR1 , PHGDH , RAC1 , TMED4 , PRMT6 , BRD2 , SREBF1 , PARP3 , PARP4 , GPR37 , TPI1 , SLC2A11 , PARP1 , LEPRE1 , SLC2A10 , PARP2 , SLC2A13 , SLC2A12 , RHOG , SIRT6 , SIRT7 , SYP , RHOF , RHOC , RHOD , GNL1 , RHOA , RHOB , COL2A1 , RHOJ , TMEM106B , PICK1 , GPR126 , PLIN2 , RHOU , HAP1 , PPARA , TLR4 , DNASE1L3 , ACSBG2 , RHOQ , PTGER4 , GRN , RNASEL , PCNA , SAMD8 , CD5L , NOL9 , AFP , PTGS2 , TYMS , CAMKK2 , UNG , DUOX1 , WRN , RECQL5 , EPCAM , PES1 , PDPN , RPS3 , PMS2 , LDLR , MBD4 , CD74 , MGMT , GDF15 , NR1H2 , APEX2 , ELP3 , GCG , MLH1 , APTX , VEGFA , KITLG , KRT19 , KRT16 , WT1 , KRT15 , APEX1 , TAOK2 , RPA4 , PLP1 , CD69 , TARDBP , CD68 , CHRM2 , SCARB2 , CHRM3 , SCARB1 , SYS1 , CHRM1 , NCF1 , NCF2 , MPG , CHRM4 , ZBTB26 , AHR , SSC4D , MANEA , TNF , PARK2 , CXCL16 , TATDN1 , STK11 , CCND2 , EME1 , CCND1 , PLAU , TNFRSF8 , CPA3 , KCNH2 , NANOS2 , IK , PHYH , LIG1 , SCARA5 , ADIPOQ , LIG4 , LIG3 , CYBA , RUNDC3A , MSH6 , MSH2 , CCNE1 , MAL , UTRN , ISYNA1 , BLM , VCP , TNKS , RHOBTB3 , UBR2 , UBR1 , HSPBP1 , FUT4 , SPTA1 , UBB , CD99 , CD163 , HELQ , FUS , SSC5D , SELE , AICDA , LRP1B , SLC2A9 , IRAK1BP1 , IL6 , CXCL12 , CDK6 , PTPRC , INS-IGF2 , NAT1 , CDK4 , CDK2 , OGN , ALB , BCL2 , GRSF1 , LRP10 , UBE2K , MAP3K11 , RAD9A , BCL2L1 , MUS81 , ONECUT2 , SPO11 , SLC2A1 , LMOD1 , HMGB3 , SLC2A2 , ETFA , YBX1 , SLC2A4 , DBH , HMGB1 , NAGPA , RND2 , MSLN , SLC2A5 , RND3 , SLC2A7 , RND1 , CALB2 , CASP9 , POLB , THBD , CASP8 , SUMO1 , EXO1 , CASP3 , DNMT3B , POLI , POLL , SCARF2 , SCARF1 , POLG , USP47 , MMP1 , ITGA1 , H2AFX , PLA2G4A , TRAF1 , SMC1A , MMP9 , DNM1 , SLC25A15 , CREB1 , TBC1D4 , PAPD7 , PIK3CA , ELF4 , CAT , TOP1 , MS4A1 , FXN , FAM60A , ITGB3BP , PDXK , PRKAA2 , SLC47A1 , LRP1 , PNKP , PON1 , LRP5 , LRP4 , LRP3 , LIN9 , PPM1D , TFPI , CDC42 , IFT74 , CDC45 , TNKS2 , VPS51 , TDG , POLD1 , UBQLN1 , DNAJB7 , CDIPT , MAPK6 , SNCA , MUTYH , POLQ , PTPN1 , DUT , POLN , NOS2 , POLM , NOS3 , CMA1 , MX1 , B3GAT1 , SOD2 , SORL1 , RAD52 , SMUG1 , SLC25A39 , DES , ERCC3 , ERCC4 , ERCC1 , ERCC2 , BAX , STUB1 , ERCC5 , VIM , PVRL1

Chemical ChemicalID Expression GeneSymbol GeneSymbolID Organism Reference (chemical-gene)
berberine NA ABCB1 5243 NA TCMID
berberine NA ACCS 84680 NA TCMID
berberine NA ACSBG2 81616 NA TCMID
berberine CTD: decreases^reaction|increases^expression ADIPOQ 9370 CTD: mus musculus 20564506
berberine NA AFP 174 NA TCMID
berberine CTD: up-regulated AHR 196 CTD: homo sapiens 16046213
berberine CTD: up-regulated AHR 196 CTD: rattus norvegicus 16046213
berberine NA AICDA 57379 NA TCMID
berberine NA AKR1B1 231 NA TCMID
berberine CTD: decreases^phosphorylation|decreases^reaction AKT1 207 CTD: homo sapiens 23954465
berberine CTD: increases^phosphorylation AKT1 207 CTD: homo sapiens 23954465
berberine NA ALB 213 NA TCMID
berberine NA ALKBH1 8846 NA TCMID
berberine NA ALKBH2 121642 NA TCMID
berberine NA ALKBH3 221120 NA TCMID
berberine NA APEX1 328 NA TCMID
berberine NA APEX2 27301 NA TCMID
berberine NA APOH 350 NA TCMID
berberine NA APTX 54840 NA TCMID
berberine NA ATF3 467 NA TCMID
berberine NA B3GAT1 27087 NA TCMID
berberine CTD: up-regulated BAX 581 CTD: homo sapiens 16505103 , 20656010
berberine CTD: up-regulated BAX 581 CTD: homo sapiens 20656010
berberine CTD: decreases^expression|decreases^reaction BCL2 596 CTD: homo sapiens 23954465
berberine CTD: down-regulated BCL2 596 CTD: homo sapiens 16505103 , 20656010
berberine CTD: down-regulated BCL2 596 CTD: homo sapiens 20656010
berberine CTD: up-regulated BCL2 596 CTD: homo sapiens 23954465
berberine CTD: down-regulated BCL2L1 598 CTD: homo sapiens 16505103
berberine NA BLM 641 NA TCMID
berberine NA BRCA1 672 NA TCMID
berberine NA BRCA2 675 NA TCMID
berberine NA BRD2 6046 NA TCMID
berberine NA BSG 682 NA TCMID
berberine NA CALB2 794 NA TCMID
berberine NA CAMKK2 10645 NA TCMID
berberine CTD: up-regulated CASP3 836 CTD: homo sapiens 16505103 , 20656010
berberine CTD: up-regulated CASP3 836 CTD: homo sapiens 20656010
berberine CTD: up-regulated CASP8 841 CTD: homo sapiens 20656010
berberine CTD: increases^cleavage CASP9 842 CTD: homo sapiens 16505103
berberine NA CAT 847 NA TCMID
berberine CTD: down-regulated CCND1 595 CTD: homo sapiens 16505103
berberine CTD: down-regulated CCND2 894 CTD: homo sapiens 16505103
berberine CTD: down-regulated CCNE1 898 CTD: homo sapiens 16505103
berberine NA CCNO 10309 NA TCMID
berberine NA CD163 9332 NA TCMID
berberine NA CD22 933 NA TCMID
berberine NA CD5L 922 NA TCMID
berberine NA CD68 968 NA TCMID
berberine NA CD69 969 NA TCMID
berberine NA CD74 972 NA TCMID
berberine NA CD99 4267 NA TCMID
berberine NA CDC42 998 NA TCMID
berberine NA CDC45 8318 NA TCMID
berberine NA CDIPT 10423 NA TCMID
berberine CTD: down-regulated CDK2 1017 CTD: homo sapiens 16505103
berberine CTD: down-regulated CDK4 1019 CTD: homo sapiens 16505103
berberine CTD: down-regulated CDK6 1021 CTD: homo sapiens 16505103
berberine CTD: up-regulated CDKN1B 1027 CTD: homo sapiens 16505103
berberine NA CFI 3426 NA TCMID
berberine CTD: up-regulated CHEK1 1111 CTD: homo sapiens 23747414
berberine CTD: up-regulated CHEK2 11200 CTD: homo sapiens 23747414
berberine NA CHRM1 1128 NA TCMID
berberine NA CHRM2 1129 NA TCMID
berberine NA CHRM3 1131 NA TCMID
berberine NA CHRM4 1132 NA TCMID
berberine NA CLEC10A 10462 NA TCMID
berberine NA CLTA 1211 NA TCMID
berberine NA CMA1 1215 NA TCMID
berberine NA COL2A1 1280 NA TCMID
berberine NA CPA3 1359 NA TCMID
berberine NA CREB1 1385 NA TCMID
berberine NA CXCL12 6387 NA TCMID
berberine NA CXCL16 58191 NA TCMID
berberine NA CYBA 1535 NA TCMID
berberine CTD: decreases^reaction|increases^expression CYP1A1 1543 CTD: mus musculus 22342832
berberine CTD: down-regulated CYP1A1 1543 CTD: homo sapiens 16046213
berberine CTD: up-regulated CYP1A1 1543 CTD: homo sapiens 16046213 , 24583342
berberine CTD: up-regulated CYP1A1 1543 CTD: mus musculus 22342832
berberine CTD: up-regulated CYP1A1 1543 CTD: rattus norvegicus 16046213
berberine NA DBH 1621 NA TCMID
berberine NA DDIT3 1649 NA TCMID
berberine NA DES 1674 NA TCMID
berberine NA DIRAS3 9077 NA TCMID
berberine NA DNAJB7 150353 NA TCMID
berberine NA DNASE1L3 1776 NA TCMID
berberine NA DNASE2B 58511 NA TCMID
berberine NA DNM1 1759 NA TCMID
berberine NA DNMT3B 1789 NA TCMID
berberine NA DUOX1 53905 NA TCMID
berberine NA DUT 1854 NA TCMID
berberine NA ELF4 2000 NA TCMID
berberine NA ELP3 55140 NA TCMID
berberine NA EME1 146956 NA TCMID
berberine NA ENDOG 2021 NA TCMID
berberine NA EPCAM 4072 NA TCMID
berberine NA ERCC1 2067 NA TCMID
berberine NA ERCC2 2068 NA TCMID
berberine NA ERCC3 2071 NA TCMID
berberine NA ERCC4 2072 NA TCMID
berberine NA ERCC5 2073 NA TCMID
berberine NA ETFA 2108 NA TCMID
berberine NA EXO1 9156 NA TCMID
berberine NA FAM60A 58516 NA TCMID
berberine NA FEN1 2237 NA TCMID
berberine NA FN1 2335 NA TCMID
berberine NA FUS 2521 NA TCMID
berberine NA FUT4 2526 NA TCMID
berberine NA FXN 2395 NA TCMID
berberine NA GATA2 2624 NA TCMID
berberine NA GATA3 2625 NA TCMID
berberine NA GCG 2641 NA TCMID
berberine NA GDF15 9518 NA TCMID
berberine NA GNL1 2794 NA TCMID
berberine NA GPR126 57211 NA TCMID
berberine NA GPR37 2861 NA TCMID
berberine NA GRN 2896 NA TCMID
berberine NA GRSF1 2926 NA TCMID
berberine CTD: affects^reaction|increases^expression H2AFX 3014 CTD: homo sapiens 23747414
berberine CTD: down-regulated H2AFX 3014 CTD: homo sapiens 23363784
berberine CTD: up-regulated H2AFX 3014 CTD: homo sapiens 23747414
berberine NA HABP4 22927 NA TCMID
berberine NA HAP1 9001 NA TCMID
berberine NA HECA 51696 NA TCMID
berberine NA HELQ 113510 NA TCMID
berberine NA HIF1A 3091 NA TCMID
berberine NA HMGB1 3146 NA TCMID
berberine NA HMGB3 3149 NA TCMID
berberine NA HMGXB3 22993 NA TCMID
berberine NA HPRT1 3251 NA TCMID
berberine NA HSPBP1 23640 NA TCMID
berberine NA IDE 3416 NA TCMID
berberine NA IFT74 80173 NA TCMID
berberine NA IK 3550 NA TCMID
berberine NA IL12B 3593 NA TCMID
berberine NA IL6 3569 NA TCMID
berberine NA INS-IGF2 723961 NA TCMID
berberine NA INSR 3643 NA TCMID
berberine NA IRAK1BP1 134728 NA TCMID
berberine NA ISYNA1 51477 NA TCMID
berberine NA ITGA1 3672 NA TCMID
berberine NA ITGB3BP 23421 NA TCMID
berberine CTD: affects^localization JUN 3725 CTD: rattus norvegicus 18294404
berberine CTD: affects^localization|increases^reaction JUN 3725 CTD: rattus norvegicus 18294404
berberine NA KCNH2 3757 NA TCMID
berberine NA KITLG 4254 NA TCMID
berberine NA KRT15 3866 NA TCMID
berberine NA KRT16 3868 NA TCMID
berberine NA KRT19 3880 NA TCMID
berberine NA KRT20 54474 NA TCMID
berberine NA KRT7 3855 NA TCMID
berberine CTD: decreases^reaction|increases^expression LDLR 3949 CTD: mus musculus 20564506
berberine CTD: increases^expression|increases^reaction LDLR 3949 CTD: rattus norvegicus 18640378
berberine CTD: increases^stability LDLR 3949 NA 18640378
berberine CTD: up-regulated LDLR 3949 CTD: rattus norvegicus 18640378
berberine NA LEPRE1 64175 NA TCMID
berberine NA LIG1 3978 NA TCMID
berberine NA LIG3 3980 NA TCMID
berberine NA LIG4 3981 NA TCMID
berberine NA LIN9 286826 NA TCMID
berberine NA LIPE 3991 NA TCMID
berberine NA LMOD1 25802 NA TCMID
berberine NA LRP1 4035 NA TCMID
berberine NA LRP10 26020 NA TCMID
berberine NA LRP1B 53353 NA TCMID
berberine NA LRP3 4037 NA TCMID
berberine NA LRP4 4038 NA TCMID
berberine NA LRP5 4041 NA TCMID
berberine NA MAL 4118 NA TCMID
berberine NA MANEA 79694 NA TCMID
berberine NA MAP3K11 4296 NA TCMID
berberine NA MAPK6 5597 NA TCMID
berberine NA MBD4 8930 NA TCMID
berberine NA MGMT 4255 NA TCMID
berberine NA MLH1 4292 NA TCMID
berberine NA MMP1 4312 NA TCMID
berberine NA MMP9 4318 NA TCMID
berberine NA MPG 4350 NA TCMID
berberine NA MS4A1 931 NA TCMID
berberine NA MSH2 4436 NA TCMID
berberine NA MSH6 2956 NA TCMID
berberine NA MSLN 10232 NA TCMID
berberine NA MSR1 4481 NA TCMID
berberine NA MUS81 80198 NA TCMID
berberine NA MUTYH 4595 NA TCMID
berberine NA MX1 4599 NA TCMID
berberine NA NAA50 80218 NA TCMID
berberine NA NAGPA 51172 NA TCMID
berberine NA NANOS2 339345 NA TCMID
berberine NA NAT1 9 NA TCMID
berberine NA NCF1 653361 NA TCMID
berberine NA NCF2 4688 NA TCMID
berberine NA NEIL1 79661 NA TCMID
berberine NA NEIL2 252969 NA TCMID
berberine NA NEIL3 55247 NA TCMID
berberine NA NKX2-1 7080 NA TCMID
berberine NA NOL9 79707 NA TCMID
berberine CTD: decreases^reaction|increases^expression NOS2 4843 CTD: mus musculus 21095217
berberine CTD: decreases^reaction|increases^expression NOS2 4843 CTD: rattus norvegicus 23523906
berberine NA NOS3 4846 NA TCMID
berberine NA NOX1 27035 NA TCMID
berberine NA NOX4 50507 NA TCMID
berberine NA NR1H2 7376 NA TCMID
berberine NA NTHL1 4913 NA TCMID
berberine NA NUDT1 4521 NA TCMID
berberine NA OGG1 4968 NA TCMID
berberine NA OGN 4969 NA TCMID
berberine NA OLR1 4973 NA TCMID
berberine NA ONECUT2 9480 NA TCMID
berberine NA PAPD7 11044 NA TCMID
berberine NA PARK2 5071 NA TCMID
berberine CTD: increases^cleavage PARP1 142 CTD: homo sapiens 16505103
berberine NA PARP2 10038 NA TCMID
berberine NA PARP3 10039 NA TCMID
berberine NA PARP4 143 NA TCMID
berberine NA PCK2 5106 NA TCMID
berberine NA PCNA 5111 NA TCMID
berberine NA PCSK9 255738 NA TCMID
berberine NA PDPN 10630 NA TCMID
berberine NA PDXK 8566 NA TCMID
berberine NA PES1 23481 NA TCMID
berberine NA PHGDH 26227 NA TCMID
berberine NA PHYH 5264 NA TCMID
berberine NA PICK1 9463 NA TCMID
berberine NA PIK3CA 5290 NA TCMID
berberine NA PLA2G4A 5321 NA TCMID
berberine NA PLAU 5328 NA TCMID
berberine NA PLIN2 123 NA TCMID
berberine NA PLP1 5354 NA TCMID
berberine NA PMS2 5395 NA TCMID
berberine NA PNKP 11284 NA TCMID
berberine NA POLB 5423 NA TCMID
berberine NA POLD1 5424 NA TCMID
berberine NA POLG 5428 NA TCMID
berberine NA POLI 11201 NA TCMID
berberine NA POLL 27343 NA TCMID
berberine NA POLM 27434 NA TCMID
berberine NA POLN 353497 NA TCMID
berberine NA POLQ 10721 NA TCMID
berberine NA PON1 5444 NA TCMID
berberine NA PPARA 5465 NA TCMID
berberine NA PPM1D 8493 NA TCMID
berberine NA PRKAA2 5563 NA TCMID
berberine NA PRKD3 23683 NA TCMID
berberine NA PRKDC 5591 NA TCMID
berberine NA PRMT6 55170 NA TCMID
berberine NA PTGER4 5734 NA TCMID
berberine CTD: decreases^reaction|increases^expression PTGS2 5743 CTD: mus musculus 21095217
berberine NA PTPN1 5770 NA TCMID
berberine NA PTPRC 5788 NA TCMID
berberine NA PVRL1 5818 NA TCMID
berberine NA RAC1 5879 NA TCMID
berberine NA RAC2 5880 NA TCMID
berberine NA RAC3 5881 NA TCMID
berberine NA RAD18 56852 NA TCMID
berberine NA RAD52 5893 NA TCMID
berberine NA RAD9A 5883 NA TCMID
berberine NA RECQL 5965 NA TCMID
berberine NA RECQL5 9400 NA TCMID
berberine NA REV1 51455 NA TCMID
berberine NA REV3L 5980 NA TCMID
berberine NA RHOA 387 NA TCMID
berberine NA RHOB 388 NA TCMID
berberine NA RHOBTB3 22836 NA TCMID
berberine NA RHOC 389 NA TCMID
berberine NA RHOD 29984 NA TCMID
berberine NA RHOF 54509 NA TCMID
berberine NA RHOG 391 NA TCMID
berberine NA RHOJ 57381 NA TCMID
berberine NA RHOQ 23433 NA TCMID
berberine NA RHOT1 55288 NA TCMID
berberine NA RHOT2 89941 NA TCMID
berberine NA RHOU 58480 NA TCMID
berberine NA RNASEL 6041 NA TCMID
berberine NA RND1 27289 NA TCMID
berberine NA RND2 8153 NA TCMID
berberine NA RND3 390 NA TCMID
berberine NA RPA4 29935 NA TCMID
berberine NA RPS3 6188 NA TCMID
berberine NA RUNDC3A 10900 NA TCMID
berberine NA SAMD8 142891 NA TCMID
berberine NA SCARA5 286133 NA TCMID
berberine NA SCARB1 949 NA TCMID
berberine NA SCARB2 950 NA TCMID
berberine NA SCARF1 8578 NA TCMID
berberine NA SCARF2 91179 NA TCMID
berberine NA SELE 6401 NA TCMID
berberine NA SETX 23064 NA TCMID
berberine NA SIRT6 51548 NA TCMID
berberine NA SIRT7 51547 NA TCMID
berberine NA SLC25A15 10166 NA TCMID
berberine NA SLC25A39 51629 NA TCMID
berberine NA SLC2A1 6513 NA TCMID
berberine NA SLC2A10 81031 NA TCMID
berberine NA SLC2A11 66035 NA TCMID
berberine NA SLC2A12 154091 NA TCMID
berberine NA SLC2A13 114134 NA TCMID
berberine NA SLC2A2 6514 NA TCMID
berberine CTD: affects^cotreatment|decreases^expression|decreases^reaction SLC2A4 6517 CTD: rattus norvegicus 19080170
berberine NA SLC2A5 6518 NA TCMID
berberine NA SLC2A7 155184 NA TCMID
berberine NA SLC2A9 56606 NA TCMID
berberine NA SLC45A4 57210 NA TCMID
berberine NA SLC47A1 55244 NA TCMID
berberine NA SLC4A3 6508 NA TCMID
berberine NA SMC1A 8243 NA TCMID
berberine NA SMUG1 23583 NA TCMID
berberine NA SNCA 6622 NA TCMID
berberine NA SOD2 6648 NA TCMID
berberine NA SORL1 6653 NA TCMID
berberine NA SPO11 23626 NA TCMID
berberine NA SPTA1 6708 NA TCMID
berberine CTD: decreases^reaction|increases^expression SREBF1 6720 CTD: mus musculus 20564506
berberine NA SSC4D 136853 NA TCMID
berberine NA SSC5D 284297 NA TCMID
berberine NA STK11 6794 NA TCMID
berberine NA STUB1 10273 NA TCMID
berberine NA SUMO1 7341 NA TCMID
berberine NA SYP 6855 NA TCMID
berberine NA SYS1 90196 NA TCMID
berberine NA TAOK2 9344 NA TCMID
berberine NA TARDBP 23435 NA TCMID
berberine NA TATDN1 83940 NA TCMID
berberine NA TBC1D4 9882 NA TCMID
berberine NA TDG 6996 NA TCMID
berberine NA TDP1 55775 NA TCMID
berberine NA TFPI 7035 NA TCMID
berberine NA THBD 7056 NA TCMID
berberine NA TIPARP 25976 NA TCMID
berberine CTD: decreases^reaction|increases^expression TLR4 7099 CTD: mus musculus 21963898
berberine NA TMED4 222068 NA TCMID
berberine NA TMEM106B 54664 NA TCMID
berberine CTD: decreases^reaction|increases^expression TNF 7124 CTD: homo sapiens 16391493
berberine CTD: decreases^reaction|increases^expression TNF 7124 CTD: mus musculus 21095217
berberine CTD: decreases^reaction|increases^expression TNF 7124 CTD: mus musculus 21867779
berberine CTD: decreases^reaction|increases^expression TNF 7124 CTD: rattus norvegicus 23523906
berberine CTD: decreases^reaction|increases^secretion TNF 7124 CTD: homo sapiens 16391493
berberine CTD: up-regulated TNF 7124 CTD: homo sapiens 20656010
berberine NA TNFRSF8 943 NA TCMID
berberine NA TNFSF11 8600 NA TCMID
berberine NA TNFSF14 8740 NA TCMID
berberine NA TNFSF8 944 NA TCMID
berberine NA TNKS 8658 NA TCMID
berberine NA TNKS2 80351 NA TCMID
berberine CTD: down-regulated TOP1 7150 CTD: homo sapiens 23747414
berberine CTD: up-regulated TP53 7157 CTD: homo sapiens 20656010
berberine NA TPI1 7167 NA TCMID
berberine CTD: up-regulated TRAF1 7185 CTD: homo sapiens 20656010
berberine NA TYMS 7298 NA TCMID
berberine NA UBB 7314 NA TCMID
berberine NA UBE2K 3093 NA TCMID
berberine NA UBQLN1 29979 NA TCMID
berberine NA UBR1 197131 NA TCMID
berberine NA UBR2 23304 NA TCMID
berberine NA UCHL1 7345 NA TCMID
berberine NA UNG 7374 NA TCMID
berberine NA USP47 55031 NA TCMID
berberine NA UTRN 7402 NA TCMID
berberine NA VCP 7415 NA TCMID
berberine NA VEGFA 7422 NA TCMID
berberine NA VIM 7431 NA TCMID
berberine NA VPS51 738 NA TCMID
berberine NA WRN 7486 NA TCMID
berberine NA WT1 7490 NA TCMID
berberine NA XPA 7507 NA TCMID
berberine NA XPC 7508 NA TCMID
berberine NA XRCC1 7515 NA TCMID
berberine NA XRCC2 7516 NA TCMID
berberine NA XRCC3 7517 NA TCMID
berberine NA YBX1 4904 NA TCMID
berberine NA ZBTB26 57684 NA TCMID